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1.
Environ Monit Assess ; 196(5): 469, 2024 Apr 24.
Artigo em Inglês | MEDLINE | ID: mdl-38656433

RESUMO

The potential of soil organic carbon fractions for agroforestry systems (AFSs) is not well understood. Five distinct AFSs were tested for its impact on soil organic carbon fractionation, carbon index, and microbial activity in North Eastern Himalayas, India. The mean labile carbon (LC) ranged from 4.55 to 5.43 kg soil-1 across the land use systems. Napier system observed the lowest very labile carbon (VLC) 12.36 kg soil-1 in 60-75-cm depth. The mean non labile carbon (NLC) ranged from 15.67 to 16.83 g kg soil-1 across the land use. Highest less labile carbon (LLC) was observed in agri-horti-silviculture (AHS) followed by agri-silvi-horticulture (ASH) land use system. The black gram + mandarin + Alnus nepalensis land use recorded higher lability index (1.66) followed by maize + Schima wallichii (1.65) in 0-15-cm depth. Among the different land use systems, carbon pool index increased in all the depths over buckwheat + mandarin. The mean carbon management index (CMI) value ranged from 167.02 to 210.12 among the land use system. The mean CMI was highest in black gram + mandarin + Alnus nepalensis (210.12) followed by soybean + Ficus hookerii + guava (191.56), maize + Schima wallichii (281.71), and lowest in buckwheat + mandarin (167.02). Among the AFSs, black gram + mandarin + Alnus nepalensis showed greater amount of carbon pool index, lability index, and carbon management index and, hence, considered the best sustainable agroforestry system to sequester more carbon in the Sikkim Himalaya. Such system also retained more different organic carbon fractions. The mean CMI value ranged from 167.02 to 210.12 among AFSs. Acid phosphatase activity was more during the rainy season followed by winter and summer season. Similar trends were followed by the urease activity in all the three seasons. Overall conclusion from this investigation is that SOC fractions, carbon index, and microbial activity levels are strongly influenced by the prevailing agroforestry systems.


Assuntos
Agricultura , Carbono , Monitoramento Ambiental , Microbiologia do Solo , Solo , Índia , Carbono/análise , Solo/química , Agricultura Florestal , 60479
2.
Environ Sci Technol ; 58(15): 6744-6752, 2024 Apr 16.
Artigo em Inglês | MEDLINE | ID: mdl-38568876

RESUMO

During the growing season of 2021, 201 soil samples from conventionally and organically managed fields from 10 European countries and 8 cropping systems were taken, and 192 residues of synthetic pesticides were analyzed. Pesticide residues were found in 97% of the samples, and 88% of the samples contained mixtures of at least 2 substances. A maximum of 21 substances were found in conventionally managed fields, and a maximum of 12 were found in organically managed fields. The number and concentration of pesticide residues varied significantly between conventional and organic fields in 70 and 50% of the case study sites, respectively. Application records were available for a selected number of fields (n = 82), and these records were compared to the detected substances. Residues from 52% of the applied pesticides were detected in the soils. Only 21% of the pesticide residues detected in the soil samples were applied during the 2021 growing season. From the application data, predicted environmental concentrations of residues in soil were calculated and compared to the measured concentrations. These estimates turned out not to be accurate. The results of this study show that most European agricultural soils contain mixtures of pesticide residues and that current calculation methods may not reliably estimate their presence.


Assuntos
Resíduos de Praguicidas , Praguicidas , Poluentes do Solo , Resíduos de Praguicidas/análise , Resíduos de Praguicidas/química , Solo/química , Agricultura , Praguicidas/análise , Europa (Continente)
3.
Sci Total Environ ; 927: 172147, 2024 Jun 01.
Artigo em Inglês | MEDLINE | ID: mdl-38569966

RESUMO

Soil organic matter (SOM) plays a pivotal role in enhancing physical and biological characteristics of soil. Humic substances constitute a substantial proportion of SOM and their increase can improve crop yields and promote agricultural sustainability. While previous research has primarily assessed the influence that humic acids (HAs) derived from natural water have on soil structure, our study focuses on the impact of HAs on soil aggregation under different fertilizer regimes. During the summer cropping season, maize was cultivated under organic and synthetic fertilizer treatments. The organic fertilizer treatment utilized barley (Hordeum vulgare L.) and hairy vetch (Vicia villosa R.) as an organic amendment five days prior to maize planting. The synthetic treatment included a synthetic fertilizer (NPK) applied at South Korea's recommended rates. The organic treatment resulted in significant improvements in the soil aggregates and stability (mean weight diameter, MWD; p < 0.05) compared to the synthetic fertilizer application. These improvements could be primarily attributed to the increased quantity and quality of HAs in the soil derived from the organic amendment. The amount of extracted HAs in the organic treatment was nearly twice that of the synthetic treatment. Additionally, the organic treatment had a 140 % larger MWD and a 40 % increase in total phenolic content compared to the synthetic treatment. The organic treatment also had an increased macronutrient uptake (p < 0.001), an 11 % increase in aboveground maize biomass, and a 21 % increase in grain yield relative to the synthetic treatment. Thus, the enhancement of HA properties through the incorporation of fresh organic manure can both directly and indirectly increase crop productivity.


Assuntos
Fertilizantes , Substâncias Húmicas , Solo , Zea mays , Substâncias Húmicas/análise , Solo/química , Zea mays/crescimento & desenvolvimento , República da Coreia , Agricultura/métodos
4.
Technol Cult ; 65(1): 7-38, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38661792

RESUMO

This essay theorizes crop seeds as deep time technologies, surveying a range of materialist approaches to the study of agriculture, from historical materialism to agroecology and actor-network theory. Recent studies of plant domestication suggest that the long history of human-plant relations and agrarian knowledge defy the reduction of seeds to products of nature or objects of property. Approaching seeds as technologies allows us to understand the actors and processes of improvement that demarcate biological material according to commercial and scientific logics. Framing seeds as a collaborative technological project with a 19,000-year history unseats industrial time as the dominant frame in the history of technology. It recasts political economy not simply as a construction of human social relations of production but also as it imagines the material used to produce life itself.


Assuntos
Agricultura , História do Século XX , Agricultura/história , Produtos Agrícolas/história , Sementes , História do Século XIX , História do Século XXI , Humanos , Tecnologia/história
5.
Environ Monit Assess ; 196(5): 479, 2024 Apr 26.
Artigo em Inglês | MEDLINE | ID: mdl-38664253

RESUMO

This research investigates the long-term determinants of carbon emissions in three diverse regions-Europe and Central Asia (ECA), Sub-Saharan Africa (SSA), and the Middle East and North Africa (MENA)-spanning 1990 to 2020. Utilizing advanced econometric models and analyses, including the Regularized Common Correlated Effects Estimator (rCCE), Common Correlated Effects Estimator (CCE), and Mean-Group (MG) approach, the study explores the intricate relationships between carbon emissions, crop production, emissions per agricultural production, energy consumption, renewable energy consumption, per capita GDP, and population. Region-specific nuances are uncovered, highlighting the varying dynamics: ECA exhibits intricate and non-significant relationships, SSA showcases significant effects of population dynamics and green technology adoption, and the MENA region reveals a nuanced interplay between emissions per agricultural production.The findings underscore the universal efficacy of green technology adoption for mitigation. Strategies for mitigating carbon emissions in the agricultural sector require diversified energy transition approaches, emphasizing efficiency enhancements, green technology adoption, and tailored population management strategies based on regional intricacies. Counterfactual simulations indicate the potential efficacy of strategic measures targeting crop production to reduce carbon emissions, while acknowledging the nuanced relationship between economic growth and emissions. Policymakers are urged to recognize the persistence in emission patterns, emphasizing the importance of targeted interventions to transition towards more sustainable trajectories. Overall, the research provides essential insights for crafting effective policies at both regional and global scales to address the complexities of climate change mitigation in the agricultural sector.


Assuntos
Mudança Climática , Produção Agrícola , Produção Agrícola/métodos , Agricultura/métodos , Produtos Agrícolas/crescimento & desenvolvimento , Oriente Médio , Europa (Continente) , Monitoramento Ambiental/métodos , África Subsaariana , África do Norte , Política Ambiental , Ásia Central
6.
Environ Monit Assess ; 196(5): 477, 2024 Apr 25.
Artigo em Inglês | MEDLINE | ID: mdl-38664307

RESUMO

Heilongjiang reclamation area serves as a crucial hub for commodity grain production and strategic reserves in China, playing a vital role in maintaining national food security. Investigating the assessment of agricultural drought risk in this region can yield valuable insights into spatial and temporal variations in drought risk. Such insights can aid in formulating effective strategies for disaster prevention and mitigation, thereby minimizing food losses caused by drought disasters. This study employs a comprehensive indicator system comprising 17 indicators categorized into hazard, exposure, vulnerability, and resistance capacity. The projection pursuit model is applied to evaluate regional drought risk, while the PSO algorithm, optimized by the SSA algorithm, addresses the limitations of low local search ability and search accuracy during the large-scale search process of the PSO optimization algorithm. This study examines and compares the optimization and convergence capabilities of three algorithms: real number encoding-based genetic algorithm (RAGA), particle swarm optimization algorithm (PSO), and sparrow algorithm-based improved particle swarm optimization algorithm (SSAPSO). The analysis demonstrates that SSAPSO exhibits superior optimization performance and convergence properties, establishing it as a highly effective algorithm for optimization tasks. The findings reveal the following trends: over time, agricultural drought risk in Heilongjiang reclamation area has generally declined, with fluctuations observed in hazard and vulnerability, an increase in exposure, and a continuous enhancement of resistance capacity. Spatially, the western region exhibits significantly higher agricultural drought risk compared to the eastern region, primarily due to elevated hazard and vulnerability, coupled with lower resistance capacity. As the agricultural economy grows and agricultural expertise accumulates, the risk of agricultural drought decreases. However, variations in economic growth among different regions lead to diverse spatial distributions of risk.


Assuntos
Agricultura , Algoritmos , Secas , China , Medição de Risco/métodos , Agricultura/métodos , Monitoramento Ambiental/métodos , Modelos Teóricos , Desastres
7.
Sci Rep ; 14(1): 9527, 2024 04 25.
Artigo em Inglês | MEDLINE | ID: mdl-38664462

RESUMO

The sustainability of the food system needs to be improved, including shortening supply chains and promoting the consumption of regional food. Here, we explore the current potential for regional food self-sufficiency in the European Alpine space by calculating the current regional food/feed energy balance, deriving the regional per capita land footprint based on current food/feed consumption rates, and modelling the current potential for regional food/feed self-sufficiency. We show that 59% of the 560 Pcal of energy currently available in the study area comes from domestic production, and almost 60% of the energy is used for livestock consumption, with high regional variability. The resulting land footprints range from 2301 to 2975 m2 cap-1 y-1. Taking into account changes in cropping patterns, partial intensification, but no expansion of agricultural land, the European Alpine space could produce 89% of its current food demand domestically, with high regional variability due to population density, availability of agricultural land, crop yields, climatic conditions and dietary habits. These findings highlight the potential and limitations of regional mountain food systems and call for new strategies to improve sustainability. Reducing the current high consumption of animal products would reduce the land footprint and increase the potential for food self-sufficiency.


Assuntos
Abastecimento de Alimentos , Europa (Continente) , Animais , Humanos , Agricultura/métodos , Gado , Produtos Agrícolas/crescimento & desenvolvimento
8.
BMC Public Health ; 24(1): 1096, 2024 Apr 20.
Artigo em Inglês | MEDLINE | ID: mdl-38643084

RESUMO

BACKGROUND: Pesticide poisoning is a major public health problem in Thailand and is the result of intensive inappropriate and unsafe use of pesticides. This analytical cross-sectional study aimed to determine the factors affecting safe pesticide-use behaviors among farm plant agriculturists in northeastern Thailand. METHODS: The study sample included 427 farm plant agriculturists in Loei Province, northeastern Thailand. Individuals were randomly selected by a multistage random sampling technique. The following data were collected via a self-administered questionnaire consisting of 8 parts: (1) sociodemographic characteristics, (2) knowledge about pesticide use, (3) perceived severity of impact from pesticide use among farm plant agriculturists, (4) perceived susceptibility to pesticide use, (5) perceived self-efficacy in the modification of safe pesticide-use behaviors, (6) perceived outcome of the modification of safe pesticide-use behaviors, (7) social support, and (8) safe pesticide-use behaviors. Frequencies, percentages, means, standard deviations, and multiple regression analyses were employed for data analysis. RESULTS: The majority of participants (79.4%) had high scores for safe pesticide-use behaviors among farm plant agriculturists (scores of 112-150). Factors that significantly affected safe pesticide-use behaviors included knowledge about pesticide use (ß = 0.282), social support (ß = 0.217), reading information from pesticide labels before pesticide use (ß = 0.207), perceived self-efficacy (ß = 0.186), female sex (ß = -0.140), rice farmer status (ß = 0.129), corn farmer status (ß = 0.127), perceived susceptibility (ß = 0.126), having received information from the internet (ß = -0.124), and perceived severity (ß = -0.098). Together, these 10 factors were found to explain 32.5% of the safe pesticide-use behaviors among farm plant agriculturists. CONCLUSIONS: Our findings indicate that there is a need to increase the number of promotional activities related to the safe use of pesticides through social support and training, with the aim of increasing the overall level of knowledge, perceived self-efficacy, perceived susceptibility, and modification of the perceived impact severity of pesticide use. Thus, relevant agencies should promote and support the safe use of pesticides by farm plant agriculturists. This study revealed that the factors affecting safe pesticide-use behaviors among farm plant agriculturists included knowledge about pesticide use, social support, reading pesticide container labels, perceived self-efficacy in the modification of pesticide-use behaviors, sex, rice farmer status, corn farmer status, perceived susceptibility to pesticide use, having received information from the internet, and perceived severity of impact from pesticide use.


Assuntos
Exposição Ocupacional , Praguicidas , Humanos , Fazendas , Agricultura , Tailândia/epidemiologia , Estudos Transversais , Fazendeiros , Zea mays , Conhecimentos, Atitudes e Prática em Saúde
9.
Microb Biotechnol ; 17(4): e14468, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38635158

RESUMO

The sweet potato whitefly Bemisia tabaci (Hemiptera: Aleyrodidae) is responsible for significant crop losses and presents one of the greatest challenges for global agricultural pest management. Management of whitefly populations and associated plant viral diseases is hindered by widespread whitefly resistance to chemical insecticides. An alternative control approach involves the use of insect-specific neurotoxins, but these require delivery from the whitefly gut into the haemocoel. Here we demonstrate that the coat protein (CP) of a begomovirus, Tomato yellow leaf curl virus, is sufficient for delivery of fused proteins into the whitefly haemocoel without virion assembly. Following feeding on the recombinant CP-P-mCherry fusion (where -P- is a proline-rich linker), mCherry fluorescence was detected in the dorsal aorta and pericardial cells of the whitefly, but not in those of whitefly fed on negative control treatments, indicating effective CP-mediated delivery of mCherry into the whitefly haemocoel. Significant mortality was observed in whiteflies fed on a fusion of CP-P to the insect-specific neurotoxin Hv1a, but not in whiteflies fed on CP-P fused to a disarmed Hv1a mutant. Begomovirus coat protein - insect neurotoxin fusions hold considerable potential for transgenic resistance to whitefly providing valuable tools for whitefly management.


Assuntos
Hemípteros , Vírus de Plantas , Animais , Neurotoxinas , Agricultura , Fluorescência
10.
Proc Natl Acad Sci U S A ; 121(16): e2318160121, 2024 Apr 16.
Artigo em Inglês | MEDLINE | ID: mdl-38598339

RESUMO

Organic carbon availability in soil is crucial for shaping microbial communities, yet, uncertainties persist concerning microbial adaptations to carbon levels and the ensuing ecological and evolutionary consequences. We investigated organic carbon metabolism, antibiotic resistance, and virus-host interactions in soils subjected to 40 y of chemical and organic fertilization that led to contrasting carbon availability: carbon-poor and carbon-rich soils, respectively. Carbon-poor soils drove the enrichment of putative genes involved in organic matter decomposition and exhibited specialization in utilizing complex organic compounds, reflecting scramble competition. This specialization confers a competitive advantage of microbial communities in carbon-poor soils but reduces their buffering capacity in terms of organic carbon metabolisms, making them more vulnerable to environmental fluctuations. Additionally, in carbon-poor soils, viral auxiliary metabolic genes linked to organic carbon metabolism increased host competitiveness and environmental adaptability through a strategy akin to "piggyback the winner." Furthermore, putative antibiotic resistance genes, particularly in low-abundance drug categories, were enriched in carbon-poor soils as an evolutionary consequence of chemical warfare (i.e., interference competition). This raises concerns about the potential dissemination of antibiotic resistance from conventional agriculture that relies on chemical-only fertilization. Consequently, carbon starvation resulting from long-term chemical-only fertilization increases microbial adaptations to competition, underscoring the importance of implementing sustainable agricultural practices to mitigate the emergence and spread of antimicrobial resistance and to increase soil carbon storage.


Assuntos
Carbono , Solo , Solo/química , Carbono/metabolismo , Agricultura/métodos , Antibacterianos/farmacologia , Farmacorresistência Bacteriana , Microbiologia do Solo
11.
Biotechniques ; 76(5): 169-173, 2024 May.
Artigo em Inglês | MEDLINE | ID: mdl-38602376

RESUMO

[Formula: see text] Researchers are using various techniques and technologies to study how plants grow in extraterrestrial conditions with the hopes of sustaining longer missions for exploring deep space as well as being able to one day cultivate crops on other planets.


Assuntos
Agricultura , Meio Ambiente Extraterreno , Voo Espacial , Agricultura/métodos , Produtos Agrícolas/crescimento & desenvolvimento , Produtos Agrícolas/genética , Plantas/genética , Exobiologia/métodos
13.
Nat Food ; 5(4): 312-322, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38605128

RESUMO

Farming externalities are believed to co-vary negatively, yet trade-offs have rarely been quantified systematically. Here we present data from UK and Brazilian pig production systems representative of most commercial systems across the world ranging from 'intensive' indoor systems through to extensive free range, Organic and woodland systems to explore co-variation among four major externality costs. We found that no specific farming type was consistently associated with good performance across all domains. Generally, systems with low land use have low greenhouse gas emissions but high antimicrobial use and poor animal welfare, and vice versa. Some individual systems performed well in all domains but were not exclusive to any particular type of farming system. Our findings suggest that trade-offs may be avoidable if mitigation focuses on lowering impacts within system types rather than simply changing types of farming.


Assuntos
Criação de Animais Domésticos , Animais , Suínos , Criação de Animais Domésticos/métodos , Brasil , Reino Unido , Bem-Estar do Animal , Gases de Efeito Estufa , Agricultura/economia
14.
World J Microbiol Biotechnol ; 40(5): 159, 2024 Apr 12.
Artigo em Inglês | MEDLINE | ID: mdl-38607454

RESUMO

Gamma-aminobutyric acid (GABA) is a non-protein amino acid which is widely applied in agriculture and pharmaceutical additive industries. GABA is synthesized from glutamate through irreversible α-decarboxylation by glutamate decarboxylase. Recently, microbial synthesis has become an inevitable trend to produce GABA due to its sustainable characteristics. Therefore, reasonable microbial platform design and metabolic engineering strategies for improving production of GABA are arousing a considerable attraction. The strategies concentrate on microbial platform optimization, fermentation process optimization, rational metabolic engineering as key metabolic pathway modification, promoter optimization, site-directed mutagenesis, modular transporter engineering, and dynamic switch systems application. In this review, the microbial producers for GABA were summarized, including lactic acid bacteria, Corynebacterium glutamicum, and Escherichia coli, as well as the efficient strategies for optimizing them to improve the production of GABA.


Assuntos
Corynebacterium glutamicum , Ácido gama-Aminobutírico , Agricultura , Corynebacterium glutamicum/genética , Indústria Farmacêutica , Engenharia , Escherichia coli/genética
15.
Adv Nutr ; 15(4): 100156, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38616069

RESUMO

Food and nutrition insecurity disproportionately impact low-income households in the United States, contributing to higher rates of chronic diseases among this population. Addressing this challenge is complex because of various factors affecting the availability and accessibility of nutritious food. Short value chain (SVC) models, informally known as local food systems, offer a systemic approach that aims to optimize resources and align values throughout and beyond the food supply chain. Although specific SVC interventions, such as farmers markets, have been studied individually, a comprehensive review of SVC models was pursued to evaluate their relative impact on food security, fruit and vegetable intake, diet quality, health-related markers, and barriers and facilitators to participation among low-income households. Our systematic literature search identified 37 articles representing 34 studies from 2000-2020. Quantitative, qualitative, and mixed-method studies revealed that farmers market interventions had been evaluated more extensively than other SVC models (i.e., produce prescription programs, community-supported agriculture, mobile markets, food hubs, farm stands, and farm-to-school). Fruit and vegetable intake was the most measured outcome; other outcomes were less explored or not measured at all. Qualitative insights highlighted common barriers to SVC use, such as lack of program awareness, limited accessibility, and cultural incongruence, whereas facilitators included health-promoting environments, community cohesion, financial incentives, and high-quality produce. Social marketing and dynamic nutrition education appeared to yield positive program outcomes. Financial incentives were used in many studies, warranting further investigation into optimal amounts across varying environmental contexts. SVC models are increasingly germane to national goals across the agriculture, social, and health care sectors. This review advances the understanding of key knowledge gaps related to their implementation and impact; it emphasizes the need for research to analyze SVC potential comprehensively across the rural-urban continuum and among diverse communities through long-term studies of measurable health impact and mixed-method studies investigating implementation best practices. This trial was registered at PROSPERO as CRD42020206532.


Assuntos
Frutas , Estado Nutricional , Humanos , Pobreza , Agricultura , Fazendas
17.
Sci Rep ; 14(1): 9445, 2024 04 24.
Artigo em Inglês | MEDLINE | ID: mdl-38658691

RESUMO

The carbon cycle in soil is significantly influenced by soil microbes. To investigate the vertical distribution of the dominant groups in agricultural soil and the carbon metabolic diversity of soil bacteria, 45 soil samples from the 0 ~ 50 cm soil layer in Hunan tobacco-rice multiple cropping farmland were collected in November 2017, and the carbon diversity of the soil bacterial community, bacterial community composition and soil physical and chemical properties were determined. The results showed that the carbon metabolic capabilities and functional diversity of the soil bacterial community decreased with depth. The three most widely used carbon sources for soil bacteria were carbohydrates, amino acids, and polymers. The dominant bacterial groups in surface soil (such as Chloroflexi, Acidobacteriota, and Bacteroidota) were significantly positively correlated with the carbon metabolism intensity. The alkali-hydrolysable nitrogen content, soil bulk density and carbon-nitrogen ratio were the key soil factors driving the differences in carbon metabolism of the soil bacterial communities in the different soil layers.


Assuntos
Bactérias , Carbono , Fazendas , Microbiologia do Solo , Solo , Carbono/metabolismo , Carbono/análise , Bactérias/metabolismo , Bactérias/classificação , Solo/química , Biodiversidade , Nitrogênio/metabolismo , Nitrogênio/análise , Ciclo do Carbono , Microbiota , Agricultura
18.
Nat Food ; 5(4): 288-292, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38561459

RESUMO

The European Union's Common Agricultural Policy strongly influences the European Union's food system via agricultural subsidies. Linking global physical input-output datasets with public subsidy data reveals that current allocation favours animal-based foods, which uses 82% of the European Union's agricultural subsidies (38% directly and 44% for animal feed). Subsidy intensity (€ kg-1) for animal-based foods approximately doubles after feed inclusion. The same animal-based foods are associated with 84% of embodied greenhouse gas emissions of EU food production while supplying 35% of EU calories and 65% of proteins.


Assuntos
Agricultura , União Europeia , Agricultura/legislação & jurisprudência , Animais , Gases de Efeito Estufa , Ração Animal , Humanos , Abastecimento de Alimentos/legislação & jurisprudência
19.
mSphere ; 9(4): e0080323, 2024 Apr 23.
Artigo em Inglês | MEDLINE | ID: mdl-38567970

RESUMO

Archaea, bacteria, and fungi in the soil are increasingly recognized as determinants of agricultural productivity and sustainability. A crucial step for exploring soil microbiomes with important ecosystem functions is to perform statistical analyses on the potential relationship between microbiome structure and functions based on comparisons of hundreds or thousands of environmental samples collected across broad geographic ranges. In this study, we integrated agricultural field metadata with microbial community analyses by targeting 2,903 bulk soil samples collected along a latitudinal gradient from cool-temperate to subtropical regions in Japan (26.1-42.8 °N). The data involving 632 archaeal, 26,868 bacterial, and 4,889 fungal operational taxonomic units detected across the fields of 19 crop plant species allowed us to conduct statistical analyses (permutational analyses of variance, generalized linear mixed models, randomization analyses, and network analyses) on the relationship among edaphic factors, microbiome compositions, and crop disease prevalence. We then examined whether the diverse microbes form species sets varying in potential ecological impacts on crop plants. A network analysis suggested that the observed prokaryotes and fungi were classified into several species sets (network modules), which differed substantially in association with crop disease prevalence. Within the network of microbe-to-microbe coexistence, ecologically diverse microbes, such as an ammonium-oxidizing archaeon, an antibiotics-producing bacterium, and a potentially mycoparasitic fungus, were inferred to play key roles in shifts between crop-disease-promotive and crop-disease-suppressive states of soil microbiomes. The bird's-eye view of soil microbiome structure will provide a basis for designing and managing agroecosystems with high disease-suppressive functions.IMPORTANCEUnderstanding how microbiome structure and functions are organized in soil ecosystems is one of the major challenges in both basic ecology and applied microbiology. Given the ongoing worldwide degradation of agroecosystems, building frameworks for exploring structural diversity and functional profiles of soil microbiomes is an essential task. Our study provides an overview of cropland microbiome states in light of potential crop-disease-suppressive functions. The large data set allowed us to explore highly functional species sets that may be stably managed in agroecosystems. Furthermore, an analysis of network architecture highlighted species that are potentially used to cause shifts from disease-prevalent states of agroecosystems to disease-suppressive states. By extending the approach of comparative analyses toward broader geographic ranges and diverse agricultural practices, agroecosystem with maximized biological functions will be further explored.


Assuntos
Archaea , Bactérias , Produtos Agrícolas , Fungos , Microbiota , Doenças das Plantas , Microbiologia do Solo , Japão , Fungos/classificação , Fungos/genética , Fungos/isolamento & purificação , Archaea/classificação , Archaea/genética , Bactérias/classificação , Bactérias/genética , Bactérias/isolamento & purificação , Produtos Agrícolas/microbiologia , Doenças das Plantas/microbiologia , Solo/química , Agricultura
20.
Nat Microbiol ; 9(4): 1007-1020, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38570675

RESUMO

Globally, half a billion people are employed in animal agriculture and are directly exposed to the associated microorganisms. However, the extent to which such exposures affect resident human microbiomes is unclear. Here we conducted a longitudinal profiling of the nasal and faecal microbiomes of 66 dairy farmers and 166 dairy cows over a year-long period. We compare farmer microbiomes to those of 60 age-, sex- and ZIP code-matched people with no occupational exposures to farm animals (non-farmers). We show that farming is associated with microbiomes containing livestock-associated microbes; this is most apparent in the nasal bacterial community, with farmers harbouring a richer and more diverse nasal community than non-farmers. Similarly, in the gut microbial communities, we identify more shared microbial lineages between cows and farmers from the same farms. Additionally, we find that shared microbes are associated with antibiotic resistance genes. Overall, our study demonstrates the interconnectedness of human and animal microbiomes.


Assuntos
Fazendeiros , Microbiota , Feminino , Humanos , Animais , Bovinos , Gado , Fazendas , Agricultura
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